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Latest Paper:
Bernhard Gottlieb University Clinic of Dentistry, Central Research Unit, Medical University of Vienna, Vienna, Austria.
Background: Reprocessing of medical devices, being classified as semi-critical B is recommended to be performed in a washer-disinfector. In order to estimate, whether the expected contaminants of the various medical disciplines can be effectively removed by this washer-disinfector, different so called "test soils" have been proposed to be tested as a marker of cleaning efficacy of the disinfector. Todays described test soils are optimised for the testing of contaminations occurring in surgical procedures, but not for dental procedures.Methods: In this study the test soils being proposed in the EN 15883-5 (e.g. KMNE soil, recipe by Koller and coagulated sheep's blood) were compared with 8 reference substances used in the conservative-prosthetic dental practice. The success of the cleaning efficacy in the washer-disinfector was checked visually and by determining the residual protein concentration on the contaminated instruments after the cleaning procedure. Results: It could be shown that in contrast to the proposed test soils of the EN 15883-5, the used reference substances of the dental practice could not be removed by the washer-disinfector. Removal of these reference substances was only possible after manual or ultrasonic cleaning. Conclusions: Since blood plays a subordinate role as a contaminant of instruments during conservative-prosthetic dental treatments, testing of the cleaning efficacy of the washer-disinfector with test soils according to the proposals of the EN 15883-5 is not representative in this discipline of dentistry. Most of the materials used in dental practice can only be removed manually or with the help of the ultrasound bath.
Yu Zheng,
Xin Liu,
Nataliya M Samoshina,
Vyacheslav A Chertkov,
Andreas H Franz,
Xin Guo,
Vyacheslav V Samoshin
Department of Chemistry, College of the Pacific, University of the Pacific, Stockton, CA 95211, USA.
A new type of pH-sensitive liposome (fliposomes) was designed based on the amphiphiles that are able to perform a pH-triggered conformational flip (flipids). This flip disrupts the liposome membrane and causes rapid release of the liposome cargo, specifically in the areas of increased acidity. The flipids (1-3) are equipped with a trans-2-morpholinocyclohexanol conformational switch, pH-Sensitive fliposomes containing one of these flipids, POPC and PEG-ceramide (molar ratio 50/45/5) were constructed and characterized. These compositions were stable at 4 degrees C and pH 7.4 for several months. Fliposomes loaded with ANTS/DPX demonstrated an unusually quick content release (in a few seconds) at pH below 5.5, which was more efficient in the case of flipid 1 with the shorter linear C12-tails. The pH-titration curve for the fliposome leakage paralleled the curve for the acid-induced conformational flip of 1-3 studied by 1H NMR. A plausible mechanism of the pH-sensitivity starts with an acid-triggered conformational flip of 1, 2 or 3, which changes the molecular size and shape, shortens the lipid tails, and perturbs the liposome membrane resulting in the content leakage.
Gene. 2012 Apr 1;496 (2):118-27
22285974
Chris A Staley,
Amy Huang,
Maria Nattestad,
Kristin T Oshiro,
Laura E Ray,
Tejas Mulye,
Zhiguo Harry Li,
Thu Le,
Justin J Stephens,
Seth R Gomez,
Allison D Moy,
Jackson C Nguyen,
Andreas H Franz,
Joan Lin-Cereghino,
Geoff P Lin-Cereghino
Department of Biological Sciences, University of the Pacific, Stockton, CA 95211, USA.
Pichia pastoris is a methylotrophic yeast that has been genetically engineered to express over one thousand heterologous proteins valued for industrial, pharmaceutical and basic research purposes. In most cases, the 5' untranslated region (UTR) of the alcohol oxidase 1 (AOX1) gene is fused to the coding sequence of the recombinant gene for protein expression in this yeast. Because the effect of the AOX1 5'UTR on protein expression is not known, site-directed mutagenesis was performed in order to decrease or increase the length of this region. Both of these types of changes were shown to affect translational efficiency, not transcript stability. While increasing the length of the 5'UTR clearly decreased expression of a β-galactosidase reporter in a proportional manner, a deletion analysis demonstrated that the AOX1 5'UTR contains a complex mixture of both positive and negative cis-acting elements, suggesting that the construction of a synthetic 5'UTR optimized for a higher level of expression may be challenging.
A Adare,
S Afanasiev,
C Aidala,
N N Ajitanand,
Y Akiba,
H Al-Bataineh,
J Alexander,
K Aoki,
Y Aramaki,
E T Atomssa,
R Averbeck,
T C Awes,
B Azmoun,
V Babintsev,
M Bai,
G Baksay,
L Baksay,
K N Barish,
B Bassalleck,
A T Basye,
S Bathe,
V Baublis,
C Baumann,
A Bazilevsky,
S Belikov,
R Belmont,
R Bennett,
A Berdnikov,
Y Berdnikov,
A A Bickley,
J S Bok,
K Boyle,
M L Brooks,
H Buesching,
V Bumazhnov,
G Bunce,
S Butsyk,
C M Camacho,
S Campbell,
C-H Chen,
C Y Chi,
M Chiu,
I J Choi,
R K Choudhury,
P Christiansen,
T Chujo,
P Chung,
O Chvala,
V Cianciolo,
Z Citron,
B A Cole,
M Connors,
P Constantin,
M Csanád,
T Csörgő,
T Dahms,
S Dairaku,
I Danchev,
K Das,
A Datta,
G David,
A Denisov,
A Deshpande,
E J Desmond,
O Dietzsch,
A Dion,
M Donadelli,
O Drapier,
A Drees,
K A Drees,
J M Durham,
A Durum,
D Dutta,
S Edwards,
Y V Efremenko,
F Ellinghaus,
T Engelmore,
A Enokizono,
H En'yo,
S Esumi,
B Fadem,
D E Fields,
M Finger,
M Finger Jr,
F Fleuret,
S L Fokin,
Z Fraenkel,
J E Frantz,
A Franz,
A D Frawley,
K Fujiwara,
Y Fukao,
T Fusayasu,
I Garishvili,
A Glenn,
H Gong,
M Gonin,
Y Goto,
R Granier de Cassagnac,
N Grau,
S V Greene,
M Grosse Perdekamp,
T Gunji,
H-Å Gustafsson,
J S Haggerty,
K I Hahn,
H Hamagaki,
J Hamblen,
R Han,
J Hanks,
E P Hartouni,
E Haslum,
R Hayano,
X He,
M Heffner,
T K Hemmick,
T Hester,
J C Hill,
M Hohlmann,
W Holzmann,
K Homma,
B Hong,
T Horaguchi,
D Hornback,
S Huang,
T Ichihara,
R Ichimiya,
J Ide,
Y Ikeda,
K Imai,
M Inaba,
D Isenhower,
M Ishihara,
T Isobe,
M Issah,
A Isupov,
D Ivanischev,
B V Jacak,
J Jia,
J Jin,
B M Johnson,
K S Joo,
D Jouan,
D S Jumper,
F Kajihara,
S Kametani,
N Kamihara,
J Kamin,
J H Kang,
J Kapustinsky,
K Karatsu,
D Kawall,
M Kawashima,
A V Kazantsev,
T Kempel,
A Khanzadeev,
K M Kijima,
B I Kim,
D H Kim,
D J Kim,
E Kim,
E J Kim,
S H Kim,
Y J Kim,
E Kinney,
K Kiriluk,
A Kiss,
E Kistenev,
L Kochenda,
B Komkov,
M Konno,
J Koster,
D Kotchetkov,
A Kozlov,
A Král,
A Kravitz,
G J Kunde,
K Kurita,
M Kurosawa,
Y Kwon,
G S Kyle,
R Lacey,
Y S Lai,
J G Lajoie,
A Lebedev,
D M Lee,
J Lee,
K Lee,
K B Lee,
K S Lee,
M J Leitch,
M A L Leite,
E Leitner,
B Lenzi,
X Li,
P Liebing,
L A Linden Levy,
T Liška,
A Litvinenko,
H Liu,
M X Liu,
B Love,
R Luechtenborg,
D Lynch,
C F Maguire,
Y I Makdisi,
A Malakhov,
M D Malik,
V I Manko,
E Mannel,
Y Mao,
H Masui,
F Matathias,
M McCumber,
P L McGaughey,
N Means,
B Meredith,
Y Miake,
A C Mignerey,
P Mikeš,
K Miki,
A Milov,
M Mishra,
J T Mitchell,
A K Mohanty,
Y Morino,
A Morreale,
D P Morrison,
T V Moukhanova,
J Murata,
S Nagamiya,
J L Nagle,
M Naglis,
M I Nagy,
I Nakagawa,
Y Nakamiya,
T Nakamura,
K Nakano,
J Newby,
M Nguyen,
R Nouicer,
A S Nyanin,
E O'Brien,
S X Oda,
C A Ogilvie,
M Oka,
K Okada,
Y Onuki,
A Oskarsson,
M Ouchida,
K Ozawa,
R Pak,
V Pantuev,
V Papavassiliou,
I H Park,
J Park,
S K Park,
W J Park,
S F Pate,
H Pei,
J-C Peng,
H Pereira,
V Peresedov,
D Yu Peressounko,
C Pinkenburg,
R P Pisani,
M Proissl,
M L Purschke,
A K Purwar,
H Qu,
J Rak,
A Rakotozafindrabe,
I Ravinovich,
K F Read,
K Reygers,
V Riabov,
Y Riabov,
E Richardson,
D Roach,
G Roche,
S D Rolnick,
M Rosati,
C A Rosen,
S S E Rosendahl,
P Rosnet,
P Rukoyatkin,
P Ružička,
B Sahlmueller,
N Saito,
T Sakaguchi,
K Sakashita,
V Samsonov,
S Sano,
T Sato,
S Sawada,
K Sedgwick,
J Seele,
R Seidl,
A Yu Semenov,
R Seto,
D Sharma,
I Shein,
T-A Shibata,
K Shigaki,
M Shimomura,
K Shoji,
P Shukla,
A Sickles,
C L Silva,
D Silvermyr,
C Silvestre,
K S Sim,
B K Singh,
C P Singh,
V Singh,
M Slunečka,
R A Soltz,
W E Sondheim,
S P Sorensen,
I V Sourikova,
N A Sparks,
P W Stankus,
E Stenlund,
S P Stoll,
T Sugitate,
A Sukhanov,
J Sziklai,
E M Takagui,
A Taketani,
R Tanabe,
Y Tanaka,
K Tanida,
M J Tannenbaum,
S Tarafdar,
A Taranenko,
P Tarján,
H Themann,
T L Thomas,
M Togawa,
A Toia,
L Tomášek,
H Torii,
R S Towell,
I Tserruya,
Y Tsuchimoto,
C Vale,
H Valle,
H W van Hecke,
E Vazquez-Zambrano,
A Veicht,
J Velkovska,
R Vértesi,
A A Vinogradov,
M Virius,
V Vrba,
E Vznuzdaev,
X R Wang,
D Watanabe,
K Watanabe,
Y Watanabe,
F Wei,
R Wei,
J Wessels,
S N White,
D Winter,
J P Wood,
C L Woody,
R M Wright,
M Wysocki,
W Xie,
Y L Yamaguchi,
K Yamaura,
R Yang,
A Yanovich,
J Ying,
S Yokkaichi,
Z You,
G R Young,
I Younus,
I E Yushmanov,
W A Zajc,
C Zhang,
S Zhou,
L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
Flow coefficients v_{n} for n=2, 3, 4, characterizing the anisotropic collective flow in Au+Au collisions at sqrt[s_{NN}]=200 GeV, are measured relative to event planes Ψ_{n}, determined at large rapidity. We report v_{n} as a function of transverse momentum and collision centrality, and study the correlations among the event planes of different order n. The v_{n} are well described by hydrodynamic models which employ a Glauber Monte Carlo initial state geometry with fluctuations, providing additional constraining power on the interplay between initial conditions and the effects of viscosity as the system evolves. This new constraint can serve to improve the precision of the extracted shear viscosity to entropy density ratio η/s.
A Adare,
S Afanasiev,
C Aidala,
N N Ajitanand,
Y Akiba,
H Al-Bataineh,
J Alexander,
A Angerami,
K Aoki,
N Apadula,
Y Aramaki,
E T Atomssa,
R Averbeck,
T C Awes,
B Azmoun,
V Babintsev,
M Bai,
G Baksay,
L Baksay,
K N Barish,
B Bassalleck,
A T Basye,
S Bathe,
V Baublis,
C Baumann,
A Bazilevsky,
S Belikov,
R Belmont,
R Bennett,
A Berdnikov,
Y Berdnikov,
J H Bhom,
D S Blau,
J S Bok,
K Boyle,
M L Brooks,
H Buesching,
V Bumazhnov,
G Bunce,
S Butsyk,
S Campbell,
A Caringi,
C-H Chen,
C Y Chi,
M Chiu,
I J Choi,
J B Choi,
R K Choudhury,
P Christiansen,
T Chujo,
P Chung,
O Chvala,
V Cianciolo,
Z Citron,
B A Cole,
Z Conesa Del Valle,
M Connors,
M Csanád,
T Csörgő,
T Dahms,
S Dairaku,
I Danchev,
K Das,
A Datta,
G David,
M K Dayananda,
A Denisov,
A Deshpande,
E J Desmond,
K V Dharmawardane,
O Dietzsch,
A Dion,
M Donadelli,
O Drapier,
A Drees,
K A Drees,
J M Durham,
A Durum,
D Dutta,
L D'Orazio,
S Edwards,
Y V Efremenko,
F Ellinghaus,
T Engelmore,
A Enokizono,
H En'yo,
S Esumi,
B Fadem,
D E Fields,
M Finger,
M Finger Jr,
F Fleuret,
S L Fokin,
Z Fraenkel,
J E Frantz,
A Franz,
A D Frawley,
K Fujiwara,
Y Fukao,
T Fusayasu,
I Garishvili,
A Glenn,
H Gong,
M Gonin,
Y Goto,
R Granier de Cassagnac,
N Grau,
S V Greene,
G Grim,
M Grosse Perdekamp,
T Gunji,
H-Å Gustafsson,
J S Haggerty,
K I Hahn,
H Hamagaki,
J Hamblen,
R Han,
J Hanks,
E Haslum,
R Hayano,
X He,
M Heffner,
T K Hemmick,
T Hester,
J C Hill,
M Hohlmann,
W Holzmann,
K Homma,
B Hong,
T Horaguchi,
D Hornback,
S Huang,
T Ichihara,
R Ichimiya,
Y Ikeda,
K Imai,
M Inaba,
D Isenhower,
M Ishihara,
M Issah,
A Isupov,
D Ivanischev,
Y Iwanaga,
B V Jacak,
J Jia,
X Jiang,
J Jin,
B M Johnson,
T Jones,
K S Joo,
D Jouan,
D S Jumper,
F Kajihara,
J Kamin,
J H Kang,
J Kapustinsky,
K Karatsu,
M Kasai,
D Kawall,
M Kawashima,
A V Kazantsev,
T Kempel,
A Khanzadeev,
K M Kijima,
J Kikuchi,
A Kim,
B I Kim,
D J Kim,
E J Kim,
Y-J Kim,
E Kinney,
A Kiss,
E Kistenev,
L Kochenda,
B Komkov,
M Konno,
J Koster,
A Král,
A Kravitz,
G J Kunde,
K Kurita,
M Kurosawa,
Y Kwon,
G S Kyle,
R Lacey,
Y S Lai,
J G Lajoie,
A Lebedev,
D M Lee,
J Lee,
K B Lee,
K S Lee,
M J Leitch,
M A L Leite,
X Li,
P Lichtenwalner,
P Liebing,
L A Linden Levy,
T Liška,
A Litvinenko,
H Liu,
M X Liu,
B Love,
D Lynch,
C F Maguire,
Y I Makdisi,
A Malakhov,
M D Malik,
V I Manko,
E Mannel,
Y Mao,
H Masui,
F Matathias,
M McCumber,
P L McGaughey,
N Means,
B Meredith,
Y Miake,
T Mibe,
A C Mignerey,
K Miki,
A Milov,
J T Mitchell,
A K Mohanty,
H J Moon,
Y Morino,
A Morreale,
D P Morrison,
T V Moukhanova,
T Murakami,
J Murata,
S Nagamiya,
J L Nagle,
M Naglis,
M I Nagy,
I Nakagawa,
Y Nakamiya,
K R Nakamura,
T Nakamura,
K Nakano,
S Nam,
J Newby,
M Nguyen,
M Nihashi,
R Nouicer,
A S Nyanin,
C Oakley,
E O'Brien,
S X Oda,
C A Ogilvie,
M Oka,
K Okada,
Y Onuki,
A Oskarsson,
M Ouchida,
K Ozawa,
R Pak,
V Pantuev,
V Papavassiliou,
I H Park,
S K Park,
W J Park,
S F Pate,
H Pei,
J-C Peng,
H Pereira,
V Peresedov,
D Yu Peressounko,
R Petti,
C Pinkenburg,
R P Pisani,
M Proissl,
M L Purschke,
H Qu,
J Rak,
I Ravinovich,
K F Read,
K Reygers,
V Riabov,
Y Riabov,
E Richardson,
D Roach,
G Roche,
S D Rolnick,
M Rosati,
C A Rosen,
S S E Rosendahl,
P Rukoyatkin,
P Ružička,
B Sahlmueller,
N Saito,
T Sakaguchi,
K Sakashita,
V Samsonov,
S Sano,
T Sato,
S Sawada,
K Sedgwick,
J Seele,
R Seidl,
R Seto,
D Sharma,
I Shein,
T-A Shibata,
K Shigaki,
M Shimomura,
K Shoji,
P Shukla,
A Sickles,
C L Silva,
D Silvermyr,
C Silvestre,
K S Sim,
B K Singh,
C P Singh,
V Singh,
M Slunečka,
R A Soltz,
W E Sondheim,
S P Sorensen,
I V Sourikova,
P W Stankus,
E Stenlund,
S P Stoll,
T Sugitate,
A Sukhanov,
J Sziklai,
E M Takagui,
A Taketani,
R Tanabe,
Y Tanaka,
S Taneja,
K Tanida,
M J Tannenbaum,
S Tarafdar,
A Taranenko,
H Themann,
D Thomas,
T L Thomas,
M Togawa,
A Toia,
L Tomášek,
H Torii,
R S Towell,
I Tserruya,
Y Tsuchimoto,
C Vale,
H Valle,
H W van Hecke,
E Vazquez-Zambrano,
A Veicht,
J Velkovska,
R Vértesi,
M Virius,
V Vrba,
E Vznuzdaev,
X R Wang,
D Watanabe,
K Watanabe,
Y Watanabe,
F Wei,
R Wei,
J Wessels,
S N White,
D Winter,
C L Woody,
R M Wright,
M Wysocki,
Y L Yamaguchi,
K Yamaura,
R Yang,
A Yanovich,
J Ying,
S Yokkaichi,
Z You,
G R Young,
I Younus,
I E Yushmanov,
W A Zajc,
S Zhou,
L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
Back-to-back hadron pair yields in d+Au and p+p collisions at sqrt[s_{NN}]=200 GeV were measured with the PHENIX detector at the Relativistic Heavy Ion Collider. Rapidity separated hadron pairs were detected with the trigger hadron at pseudorapidity |η|<0.35 and the associated hadron at forward rapidity (deuteron direction, 3.0<η<3.8). Pairs were also detected with both hadrons measured at forward rapidity; in this case, the yield of back-to-back hadron pairs in d+Au collisions with small impact parameters is observed to be suppressed by a factor of 10 relative to p+p collisions. The kinematics of these pairs is expected to probe partons in the Au nucleus with a low fraction x of the nucleon momenta, where the gluon densities rise sharply. The observed suppression as a function of nuclear thickness, p_{T}, and η points to cold nuclear matter effects arising at high parton densities.
A Adare,
S Afanasiev,
C Aidala,
N N Ajitanand,
Y Akiba,
H Al-Bataineh,
J Alexander,
A Angerami,
K Aoki,
N Apadula,
L Aphecetche,
Y Aramaki,
J Asai,
E T Atomssa,
R Averbeck,
T C Awes,
B Azmoun,
V Babintsev,
M Bai,
G Baksay,
L Baksay,
A Baldisseri,
K N Barish,
P D Barnes,
B Bassalleck,
A T Basye,
S Bathe,
S Batsouli,
V Baublis,
C Baumann,
A Bazilevsky,
S Belikov,
R Belmont,
R Bennett,
A Berdnikov,
Y Berdnikov,
J H Bhom,
A A Bickley,
D S Blau,
J G Boissevain,
J S Bok,
H Borel,
K Boyle,
M L Brooks,
H Buesching,
V Bumazhnov,
G Bunce,
S Butsyk,
C M Camacho,
S Campbell,
A Caringi,
B S Chang,
W C Chang,
J-L Charvet,
C-H Chen,
S Chernichenko,
C Y Chi,
M Chiu,
I J Choi,
J B Choi,
R K Choudhury,
P Christiansen,
T Chujo,
P Chung,
A Churyn,
O Chvala,
V Cianciolo,
Z Citron,
B A Cole,
Z Conesa Del Valle,
M Connors,
P Constantin,
M Csanád,
T Csörgő,
T Dahms,
S Dairaku,
I Danchev,
K Das,
A Datta,
G David,
M K Dayananda,
A Denisov,
D d'Enterria,
A Deshpande,
E J Desmond,
K V Dharmawardane,
O Dietzsch,
A Dion,
M Donadelli,
O Drapier,
A Drees,
K A Drees,
A K Dubey,
J M Durham,
A Durum,
D Dutta,
V Dzhordzhadze,
L D'Orazio,
S Edwards,
Y V Efremenko,
F Ellinghaus,
T Engelmore,
A Enokizono,
H En'yo,
S Esumi,
K O Eyser,
B Fadem,
D E Fields,
M Finger,
M Finger Jr,
F Fleuret,
S L Fokin,
Z Fraenkel,
J E Frantz,
A Franz,
A D Frawley,
K Fujiwara,
Y Fukao,
T Fusayasu,
I Garishvili,
A Glenn,
H Gong,
M Gonin,
J Gosset,
Y Goto,
R Granier de Cassagnac,
N Grau,
S V Greene,
G Grim,
M Grosse Perdekamp,
T Gunji,
H-Å Gustafsson,
A Hadj Henni,
J S Haggerty,
K I Hahn,
H Hamagaki,
J Hamblen,
R Han,
J Hanks,
E P Hartouni,
K Haruna,
E Haslum,
R Hayano,
X He,
M Heffner,
T K Hemmick,
T Hester,
J C Hill,
M Hohlmann,
W Holzmann,
K Homma,
B Hong,
T Horaguchi,
D Hornback,
S Huang,
T Ichihara,
R Ichimiya,
H Iinuma,
Y Ikeda,
K Imai,
J Imrek,
M Inaba,
D Isenhower,
M Ishihara,
T Isobe,
M Issah,
A Isupov,
D Ivanischev,
Y Iwanaga,
B V Jacak,
J Jia,
X Jiang,
J Jin,
B M Johnson,
T Jones,
K S Joo,
D Jouan,
D S Jumper,
F Kajihara,
S Kametani,
N Kamihara,
J Kamin,
J H Kang,
J Kapustinsky,
K Karatsu,
M Kasai,
D Kawall,
M Kawashima,
A V Kazantsev,
T Kempel,
A Khanzadeev,
K M Kijima,
J Kikuchi,
A Kim,
B I Kim,
D H Kim,
D J Kim,
E Kim,
E J Kim,
S H Kim,
Y-J Kim,
E Kinney,
K Kiriluk,
A Kiss,
E Kistenev,
J Klay,
C Klein-Boesing,
L Kochenda,
B Komkov,
M Konno,
J Koster,
A Kozlov,
A Král,
A Kravitz,
G J Kunde,
K Kurita,
M Kurosawa,
M J Kweon,
Y Kwon,
G S Kyle,
R Lacey,
Y S Lai,
J G Lajoie,
D Layton,
A Lebedev,
D M Lee,
J Lee,
K B Lee,
K S Lee,
T Lee,
M J Leitch,
M A L Leite,
B Lenzi,
X Li,
P Lichtenwalner,
P Liebing,
L A Linden Levy,
T Liška,
A Litvinenko,
H Liu,
M X Liu,
B Love,
D Lynch,
C F Maguire,
Y I Makdisi,
A Malakhov,
M D Malik,
V I Manko,
E Mannel,
Y Mao,
L Mašek,
H Masui,
F Matathias,
M McCumber,
P L McGaughey,
D McGlinchey,
N Means,
B Meredith,
Y Miake,
T Mibe,
A C Mignerey,
P Mikeš,
K Miki,
A Milov,
M Mishra,
J T Mitchell,
A K Mohanty,
H J Moon,
Y Morino,
A Morreale,
D P Morrison,
T V Moukhanova,
D Mukhopadhyay,
T Murakami,
J Murata,
S Nagamiya,
J L Nagle,
M Naglis,
M I Nagy,
I Nakagawa,
Y Nakamiya,
K R Nakamura,
T Nakamura,
K Nakano,
S Nam,
J Newby,
M Nguyen,
M Nihashi,
T Niita,
R Nouicer,
A S Nyanin,
C Oakley,
E O'Brien,
S X Oda,
C A Ogilvie,
M Oka,
K Okada,
Y Onuki,
A Oskarsson,
M Ouchida,
K Ozawa,
R Pak,
A P T Palounek,
V Pantuev,
V Papavassiliou,
I H Park,
J Park,
S K Park,
W J Park,
S F Pate,
H Pei,
J-C Peng,
H Pereira,
V Peresedov,
D Yu Peressounko,
R Petti,
C Pinkenburg,
R P Pisani,
M Proissl,
M L Purschke,
A K Purwar,
H Qu,
J Rak,
A Rakotozafindrabe,
I Ravinovich,
K F Read,
S Rembeczki,
K Reygers,
V Riabov,
Y Riabov,
E Richardson,
D Roach,
G Roche,
S D Rolnick,
M Rosati,
C A Rosen,
S S E Rosendahl,
P Rosnet,
P Rukoyatkin,
P Ružička,
V L Rykov,
B Sahlmueller,
N Saito,
T Sakaguchi,
S Sakai,
K Sakashita,
V Samsonov,
S Sano,
T Sato,
S Sawada,
K Sedgwick,
J Seele,
R Seidl,
A Yu Semenov,
V Semenov,
R Seto,
D Sharma,
I Shein,
T-A Shibata,
K Shigaki,
M Shimomura,
K Shoji,
P Shukla,
A Sickles,
C L Silva,
D Silvermyr,
C Silvestre,
K S Sim,
B K Singh,
C P Singh,
V Singh,
M Slunečka,
A Soldatov,
R A Soltz,
W E Sondheim,
S P Sorensen,
I V Sourikova,
F Staley,
P W Stankus,
E Stenlund,
M Stepanov,
A Ster,
S P Stoll,
T Sugitate,
C Suire,
A Sukhanov,
J Sziklai,
E M Takagui,
A Taketani,
R Tanabe,
Y Tanaka,
S Taneja,
K Tanida,
M J Tannenbaum,
S Tarafdar,
A Taranenko,
P Tarján,
H Themann,
D Thomas,
T L Thomas,
M Togawa,
A Toia,
L Tomášek,
Y Tomita,
H Torii,
R S Towell,
V-N Tram,
I Tserruya,
Y Tsuchimoto,
C Vale,
H Valle,
H W van Hecke,
E Vazquez-Zambrano,
A Veicht,
J Velkovska,
R Vértesi,
A A Vinogradov,
M Virius,
A Vossen,
V Vrba,
E Vznuzdaev,
X R Wang,
D Watanabe,
K Watanabe,
Y Watanabe,
F Wei,
R Wei,
J Wessels,
S N White,
D Winter,
C L Woody,
R M Wright,
M Wysocki,
W Xie,
Y L Yamaguchi,
K Yamaura,
R Yang,
A Yanovich,
J Ying,
S Yokkaichi,
Z You,
G R Young,
I Younus,
I E Yushmanov,
W A Zajc,
O Zaudtke,
C Zhang,
S Zhou,
L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
We present measurements of J/ψ yields in d+Au collisions at sqrt[s_{NN}]=200 GeV recorded by the PHENIX experiment and compare them with yields in p+p collisions at the same energy per nucleon-nucleon collision. The measurements cover a large kinematic range in J/ψ rapidity (-2.2<y<2.4) with high statistical precision and are compared with two theoretical models: one with nuclear shadowing combined with final state breakup and one with coherent gluon saturation effects. In order to remove model dependent systematic uncertainties we also compare the data to a simple geometric model. The forward rapidity data are inconsistent with nuclear modifications that are linear or exponential in the density weighted longitudinal thickness, such as those from the final state breakup of the bound state.
Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg, Germany.
AIMS The application of Ralstonia eutropha H16 for producing polyhydroxyalkanoates as bioplastics is limited by the incapability of the bacterium to utilize glucose as a growth substrate. This study aims in characterizing glucose-utilizing strains that arose after incubation with high glucose levels, in comparison with previously published mutants, generated either by mutagenesis or by metabolic engineering. METHODS AND RESULTS Cultivations on solid and liquid media showed that the application of high substrate concentrations rapidly induced a glucose-positive phenotype. The time span until the onset of growth and the frequency of glucose-utilizing colonies were correlated to the initial glucose concentration. All mutants exhibited elevated activities of glucose-6-phosphate dehydrogenase. The glucose-positive phenotype was abolished after deleting genes for the N-acetylglucosamine phosphotransferase system. CONCLUSIONS A procedure is provided for selecting glucose-utilizing R. eutropha H16 in an unprecedented short time period and without any mutagenic treatment. An altered N-acetylglucosamine phosphotransferase system appears to be a common motif in all glucose-utilizing mutants examined so far. SIGNIFICANCE AND IMPACT OF THE STUDY The correlation of the applied glucose concentration and the appearance of glucose-utilizing mutants poses questions about the randomness or the specificity of adaptive mutations in general. Furthermore, glucose-adapted strains of R. eutropha H16 could be useful for the production of bioplastics.
Mol Cell. 2011 Oct 7;44 (1):85-96
21981920
André Franz,
Michael Orth,
Paul A Pirson,
Remi Sonneville,
J Julian Blow,
Anton Gartner,
Olaf Stemmann,
Thorsten Hoppe
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Zülpicher Strasse 47a, 50674 Cologne, Germany.
Faithful transmission of genomic information requires tight spatiotemporal regulation of DNA replication factors. In the licensing step of DNA replication, CDT-1 is loaded onto chromatin to subsequently promote the recruitment of additional replication factors, including CDC-45 and GINS. During the elongation step, the CDC-45/GINS complex moves with the replication fork; however, it is largely unknown how its chromatin association is regulated. Here, we show that the chaperone-like ATPase CDC-48/p97 coordinates degradation of CDT-1 with release of the CDC-45/GINS complex. C. elegans embryos lacking CDC-48 or its cofactors UFD-1/NPL-4 accumulate CDT-1 on mitotic chromatin, indicating a critical role of CDC-48 in CDT-1 turnover. Strikingly, CDC-48(UFD-1/NPL-4)-deficient embryos show persistent chromatin association of CDC-45/GINS, which is a consequence of CDT-1 stabilization. Moreover, our data confirmed a similar regulation in Xenopus egg extracts, emphasizing a conserved coordination of licensing and elongation events during eukaryotic DNA replication by CDC-48/p97.
Biotechnol J. 2012 Apr ;7 (4):546-57
21751385
Engler-Bunte-Institut, Fuel Chemistry and Technology, Karlsruhe Institute of Technology, Karlsruhe, Germany. anette.franz@kit.edu
Microalgae can be used to produce versatile high-value fuels, such as methane, biodiesel, ethanol, or hydrogen gas. One of the most important factors that influence the economics of microalgae cultivation is the primary production of biomass per unit area. This is determined by productivity rates during cultivation, which are influenced by the local climate conditions (solar irradiation, temperature). To compare locations in different climate regions for microalgae cultivation, a mathematical model for an idealized closed photobioreactor was developed. The applied growth kinetics were based on theoretical maximum photon-conversion efficiencies (for the conversion of solar energy to chemical energy in the form of biomass). Known or estimated temperature effects for different algal strains were incorporated. The model was used to calculate hourly average areal productivity rates as well as annual primary production values under local conditions at seven example locations. Here, hourly weather data (solar irradiance and air temperature) were taken into account. According to these model calculations, maximum annual yields were achieved in regions with high irradiation and temperature patterns in or near the optimum range of the specific algal strain (here, desert and equatorial humid climates). The developed model can be used as a tool to assess and compare individual locations for microalgae cultivation.
A Adare,
S Afanasiev,
C Aidala,
N N Ajitanand,
Y Akiba,
R Akimoto,
J Alexander,
H Al-Ta'ani,
K R Andrews,
A Angerami,
K Aoki,
N Apadula,
E Appelt,
Y Aramaki,
R Armendariz,
E C Aschenauer,
T C Awes,
B Azmoun,
V Babintsev,
M Bai,
B Bannier,
K N Barish,
B Bassalleck,
A T Basye,
S Bathe,
V Baublis,
C Baumann,
A Bazilevsky,
R Belmont,
J Ben-Benjamin,
R Bennett,
A Berdnikov,
Y Berdnikov,
D S Blau,
J S Bok,
K Boyle,
M L Brooks,
D Broxmeyer,
H Buesching,
V Bumazhnov,
G Bunce,
S Butsyk,
S Campbell,
A Caringi,
P Castera,
C-H Chen,
C Y Chi,
M Chiu,
I J Choi,
J B Choi,
R K Choudhury,
P Christiansen,
T Chujo,
O Chvala,
V Cianciolo,
Z Citron,
B A Cole,
Z Conesa del Valle,
M Connors,
M Csanád,
T Csörgo,
S Dairaku,
A Datta,
G David,
M K Dayananda,
A Denisov,
A Deshpande,
E J Desmond,
K V Dharmawardane,
O Dietzsch,
A Dion,
M Donadelli,
L D'Orazio,
O Drapier,
A Drees,
K A Drees,
J M Durham,
A Durum,
Y V Efremenko,
T Engelmore,
A Enokizono,
H En'yo,
S Esumi,
B Fadem,
D E Fields,
M Finger Jr,
M Finger,
F Fleuret,
S L Fokin,
J E Frantz,
A Franz,
A D Frawley,
Y Fukao,
T Fusayasu,
I Garishvili,
A Glenn,
X Gong,
M Gonin,
Y Goto,
R Granier de Cassagnac,
N Grau,
S V Greene,
M Grosse Perdekamp,
T Gunji,
L Guo,
H-Å Gustafsson,
J S Haggerty,
K I Hahn,
H Hamagaki,
J Hamblen,
J Hanks,
R Han,
C Harper,
K Hashimoto,
E Haslum,
R Hayano,
T K Hemmick,
T Hester,
X He,
J C Hill,
R S Hollis,
W Holzmann,
K Homma,
B Hong,
T Horaguchi,
Y Hori,
D Hornback,
S Huang,
T Ichihara,
R Ichimiya,
H Iinuma,
Y Ikeda,
K Imai,
M Inaba,
A Iordanova,
D Isenhower,
M Ishihara,
M Issah,
A Isupov,
D Ivanischev,
Y Iwanaga,
B V Jacak,
J Jia,
X Jiang,
B M Johnson,
T Jones,
K S Joo,
D Jouan,
J Kamin,
S Kaneti,
B H Kang,
J H Kang,
J S Kang,
J Kapustinsky,
K Karatsu,
M Kasai,
D Kawall,
A V Kazantsev,
T Kempel,
A Khanzadeev,
K M Kijima,
B I Kim,
D J Kim,
E J Kim,
Y-J Kim,
Y K Kim,
E Kinney,
Á Kiss,
E Kistenev,
D Kleinjan,
P Kline,
L Kochenda,
B Komkov,
M Konno,
J Koster,
D Kotov,
A Král,
G J Kunde,
K Kurita,
M Kurosawa,
Y Kwon,
G S Kyle,
R Lacey,
Y S Lai,
J G Lajoie,
A Lebedev,
D M Lee,
J Lee,
K B Lee,
K S Lee,
S H Lee,
S R Lee,
M J Leitch,
M A L Leite,
P Lichtenwalner,
S H Lim,
L A Linden Levy,
A Litvinenko,
H Liu,
M X Liu,
X Li,
B Love,
D Lynch,
C F Maguire,
Y I Makdisi,
A Malakhov,
A Manion,
V I Manko,
E Mannel,
Y Mao,
H Masui,
M McCumber,
P L McGaughey,
D McGlinchey,
C McKinney,
N Means,
M Mendoza,
B Meredith,
Y Miake,
T Mibe,
A C Mignerey,
K Miki,
A Milov,
J T Mitchell,
Y Miyachi,
A K Mohanty,
H J Moon,
Y Morino,
A Morreale,
D P Morrison,
S Motschwiller,
T V Moukhanova,
T Murakami,
J Murata,
S Nagamiya,
J L Nagle,
M Naglis,
M I Nagy,
I Nakagawa,
Y Nakamiya,
K R Nakamura,
T Nakamura,
K Nakano,
J Newby,
M Nguyen,
M Nihashi,
R Nouicer,
A S Nyanin,
C Oakley,
E O'Brien,
C A Ogilvie,
K Okada,
M Oka,
A Oskarsson,
M Ouchida,
K Ozawa,
R Pak,
V Pantuev,
V Papavassiliou,
B H Park,
I H Park,
S K Park,
S F Pate,
H Pei,
J-C Peng,
H Pereira,
V Peresedov,
D Yu Peressounko,
R Petti,
C Pinkenburg,
R P Pisani,
M Proissl,
M L Purschke,
H Qu,
J Rak,
I Ravinovich,
K F Read,
K Reygers,
V Riabov,
Y Riabov,
E Richardson,
D Roach,
G Roche,
S D Rolnick,
M Rosati,
S S E Rosendahl,
P Rukoyatkin,
B Sahlmueller,
N Saito,
T Sakaguchi,
V Samsonov,
S Sano,
M Sarsour,
T Sato,
M Savastio,
S Sawada,
K Sedgwick,
R Seidl,
R Seto,
D Sharma,
I Shein,
T-A Shibata,
K Shigaki,
H H Shim,
M Shimomura,
K Shoji,
P Shukla,
A Sickles,
C L Silva,
D Silvermyr,
C Silvestre,
K S Sim,
B K Singh,
C P Singh,
V Singh,
M Slunečka,
T Sodre,
R A Soltz,
W E Sondheim,
S P Sorensen,
I V Sourikova,
P W Stankus,
E Stenlund,
S P Stoll,
T Sugitate,
A Sukhanov,
J Sun,
J Sziklai,
E M Takagui,
A Takahara,
A Taketani,
R Tanabe,
Y Tanaka,
S Taneja,
K Tanida,
M J Tannenbaum,
S Tarafdar,
A Taranenko,
E Tennant,
H Themann,
D Thomas,
M Togawa,
L Tomášek,
M Tomášek,
H Torii,
R S Towell,
I Tserruya,
Y Tsuchimoto,
K Utsunomiya,
C Vale,
H W van Hecke,
E Vazquez-Zambrano,
A Veicht,
J Velkovska,
R Vértesi,
M Virius,
A Vossen,
V Vrba,
E Vznuzdaev,
X R Wang,
D Watanabe,
K Watanabe,
Y Watanabe,
Y S Watanabe,
F Wei,
R Wei,
J Wessels,
S N White,
D Winter,
C L Woody,
R M Wright,
M Wysocki,
Y L Yamaguchi,
R Yang,
A Yanovich,
J Ying,
S Yokkaichi,
J S Yoo,
G R Young,
I Younus,
Z You,
I E Yushmanov,
W A Zajc,
A Zelenski,
S Zhou,
L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
Large parity-violating longitudinal single-spin asymmetries A(L)(e+)=-0.86(-0.14)(+0.30) and A(L)(e-)= 0.88(-0.71)(+0.12) are observed for inclusive high transverse momentum electrons and positrons in polarized p+p collisions at a center-of-mass energy of sqrt[s]= 500 GeV with the PHENIX detector at RHIC. These e± come mainly from the decay of W± and Z0 bosons, and their asymmetries directly demonstrate parity violation in the couplings of the W± to the light quarks. The observed electron and positron yields were used to estimate W± boson production cross sections for the e± channels of σ(pp → W+ X) × BR(W+ → e+ ν(e))= 144.1 ± 21.2(stat)(-10.3)(+3.4)(syst) ± 21.6(norm) pb, and σ(pp → W- X) × BR(W- → e- ν[over ¯](e))= 31.7 ± 12.1(stat)(-8.2)(+10.1)(syst) ± 4.8(norm) pb.
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