Abstract The purpose of this study was to determine whether antimicrobial resistance (AMR) in foodborne pathogens (Escherichia coli O157, Salmonella, and Campylobacter) and non-type-specific E. coli obtained from fecal samples of feedlot cattle was associated with antimicrobial drug (AMD) use. A secondary objective was to determine if AMR in non-type-specific E. coli could be used as a predictor of AMR in foodborne pathogens. Fecal samples were collected from pen floors in 21 Alberta feedlots during March through December 2004, and resistance prevalence was estimated by season (Spring, Fall) and cattle type (fewest days-on-feed and closest to slaughter). AMD exposures were obtained by calculating therapeutic animal daily doses for each drug before sampling from feedlot records. Generalized linear mixed models were used to investigate the relationship between each AMR and AMD use. Non-type-specific E. coli was commonly recovered from fecal samples (88.62%), and the highest prevalence of resistance was found toward tetracycline (53%), streptomycin (28%), and sulfadiazine (48%). Campylobacter jejuni was recovered from 55.3% of the fecal samples, and resistance was generally less for the drugs that were evaluated (doxycycline 38.1%, ciprofloxacin 2.6%, nalidixic acid 1.64%, erythromycin 1.2%). E. coli O157 and Salmonella were recovered much less frequently (7% and 1% prevalence, respectively). The prevalence of recovery for the bacteria studied varied between seasons and cattle types, as did patterns of AMR. Among non-type-specific E. coli, resistance to tetracycline, streptomycin, and sulfadiazine was found to be positively associated with in-feed exposure as well as injectable tetracycline, but these differences were relatively small and of questionable practical relevance. Among C. jejuni isolates, cattle type was significantly associated with doxycycline resistance. Results suggested that resistance in non-type-specific E. coli to chloramphenicol, trimethoprim/sulfamethoxazole, and tetracycline might be used as predictors of resistance to these drugs in E. coli O157 recovered from the same fecal samples.

Abstract Our objective was to define and compare pulsed-field gel electrophoresis (PFGE) profiles of Escherichia coli O157 isolated from cattle feces and carcass samples to evaluate relationships between beef carcass contamination and fecal shedding of E. coli O157 at harvest. We used PFGE separation of Xba1-digested DNA to characterize E. coli O157 isolates (n = 174) from preevisceration carcasses (n = 39) and feces (n = 135) that were recovered from 37 E. coli O157-positive truckloads sampled at a commercial abattoir. Semiquantitative fecal culture techniques differentiated high-shedding, low-shedding, and negative cattle. Among all isolates, there were 17 PFGE types (95% homology) and 37 subtypes (100% homology). Specific subtypes were detected on multiple occasions and from different sample types within loads, among loads, and among days. Seventeen subtypes were recovered from carcasses; most were also recovered from feces of high-shedding cattle (13) and low-shedding cattle (14). Within truckload, the percentages of carcass isolates that were identical to high-shedder or low-shedder fecal isolates, as determined by PFGE, were 69.2% and 46.0%, respectively, whereas among different truckloads within the same study day, the percentages of carcass isolates that were the same subtype as high-shedder or low-shedder fecal isolates were 35.3% and 58.8%, respectively. Our results suggest that cattle feces from both low- and high-shedders pose a potential risk for E. coli O157 contamination of carcasses. Truckload may be an important factor in the potential transmission of E. coli O157, but isolates from carcasses also may be similar to those from feces of cattle on different truckloads and harvest days.

Conventional feeding systems use pharmaceutical products not allowed in natural or organic systems for finishing cattle. This review of data compares the performance effects (ADG, G:F, DMI) of technologies used in conventional feeding programs that are prohibited in organic and/or natural programs. The technologies evaluated were steroid implants, monensin, tylosin, endectocides, and metaphylaxis with any antimicrobial. For inclusion in this analysis, studies were conducted in North America; reported randomization to treatment group; utilized beef cattle; contained an untreated control group; and were sourced from peer reviewed journals. Forest plots were used to visually examine the data for trends towards a uniform effect of the technology on the outcomes of interest (ADG, DMI, G:F). Technologies that displayed a uniform response compared to negative controls on the forest plot were then analyzed using mixed models. Examination of forest plots for endectocides, steroid implants, monensin and metaphylaxis technologies appeared to show performance advantages for treated cattle relative to cattle in negative control groups. An insufficient number of studies met the inclusion criteria to conduct meta-analyses comparing endectocides, monensin or tylosin to negative controls. Average daily gain in feeder cattle given metaphylaxis on arrival was 0.11 kg/d (P < 0.01) greater relative to cattle that did not receive metaphylaxis on arrival. Implanting heifers increased ADG by 0.08 kg/d compared to non-implanted controls (P = 0.09). Implants had no effect on G:F (P = 0.14) in heifers or on DMI (P = 0.44) relative to non-implanted control heifers. Implanting steers was associated with greater ADG by 0.25 kg/d (P < 0.01) and DMI by 0.53 kg/d (P < 0.01) relative to non-implanted control steers. Implants also improved G:F in steers relative to non-implanted steers by 0.02 (0.17 vs. 0.15; implanted vs. controls, P < 0.01)(n = 21 studies). When average estimated differences in ADG and G:F for implanted and non-implanted steers were incorporated into a breakeven model, implanted steers had a $77 per head lower cost of production than non-implanted steers and $349 per head lower cost of production than organically raised steers. These data illustrate the importance of capturing premiums when operating natural and organic production systems to maintain economic viability.

Bovine respiratory disease (BRD) diagnosis during the postweaning phase of beef production is an important component of effective preventive health and treatment programs. Although identification of diseased animals based on signs of clinical illness (CI) is a common method in the beef industry for identifying BRD, very little information is available on the accuracy of this method. Previous investigators hypothesized that monitoring pulmonary lesions at harvest (LU) could be a more reliable indicator of disease status during the postweaning phase. A structured literature review was conducted to identify research that compared CI and LU. Because there is no true gold standard for diagnosing BRD, Bayesian methods were used to estimate the sensitivity and specificity of each diagnostic method relative to a BRD diagnosis at any time during the postweaning phase. Results from the current study indicate that the estimated diagnostic sensitivity and specificity of CI were 61.8%(97.5% probability interval [PI]: 55.7, 68.4) and 62.8%(97.5% PI: 60.0, 65.7), respectively. Use of LU for a BRD diagnosis was estimated to have a sensitivity of 77.4%(97.5% PI: 66.2, 87.3) and a specificity of 89.7%(97.5% PI: 86.0, 93.8). Further analysis revealed that the probabilities of LU having higher sensitivity and specificity than CI were 99.4% and 100%, respectively. The present research indicates that neither method was perfect, and both methods were relatively poor at correctly classifying truly diseased animals (sensitivity) but that LU was more accurate than CI for BRD diagnosis. Results from the present study should be considered when these diagnostic methods are used to evaluate BRD outcomes in clinical and research settings.

We determined the prevalence of Escherichia coli O157:H7 in organically- and naturally-raised beef cattle at slaughter and compared antibiotic susceptibility profiles of the isolates to those from conventionally-raised beef cattle. Prevalence of E. coli O157:H7 were 14.8 and 14.2% for organically- and naturally-raised cattle, respectively. No major difference in antibiotic susceptibility patterns was observed between the isolates.

The occurrence of generic Escherichia coli, E. coli O157, Salmonella, and Campylobacter in cattle manure, beef carcasses, catch basin water, and soils receiving manure application was determined in 21 Alberta feedlots. In cattle manure, generic E. coli (98%, 2069/2100) and Campylobacter (76%, 1590/2100) were frequently detected; E. coli O157 (7%, 143/2100) and Salmonella (1%, 20/2100) were less frequently detected. Samples from beef carcasses in the cooler following Hazard Analysis Critical Control Point interventions yielded only 1 isolate each of generic E. coli and Campylobacter (1/1653) and no Salmonella (0/1653). Catch basin water specimens were positive for generic E. coli in both the spring (62%, 13/21) and the fall (52%, 11/21). Other bacteria were detected only in the spring water specimens, including E. coli O157 (29%, 6/21), Salmonella (5%, 1/21), and Campylobacter (52%, 11/21). Generic E. coli was frequently isolated from soil specimens (30%, 27/88), but E. coli O157 was not found in soil samples obtained in the spring and was only occasionally detected in the fall samples (9%, 3/32). Salmonella were occasionally found in the soil specimens collected in the spring (3%, 2/56), but not in the fall season (0/32). Campylobacter jejuni was frequent in cattle manure (66%, 1070/1623), but rare in carcass and environmental samples. E. coli O157 and Salmonella were rarely detected in cattle or the environment. Generic E. coli and Salmonella were rarely detected on carcasses.

Abstract Escherichia coli O157:H7 and Salmonella are foodborne pathogens that reside in the gut of cattle and are shed in the feces. Previous work indicated a positive association between feeding cattle distiller's grains (DG) and an increase in E. coli O157:H7 prevalence. Feeding processed grains also has been shown to affect fecal prevalence of E. coli O157:H7. The objective of this study was to evaluate the effect of feeding DG and dry-rolled corn (DRC), alone or in combination, on fecal prevalence of E. coli O157:H7 and Salmonella in finishing cattle. Cattle were allotted to pens (n = 28), and fed dietary treatments (n = 150 days) structured in a 2 x 2 factorial arrangement; the factors were 0% or 25% dried corn DG with solubles (DDGS) and 0% or 25% DRC in steam-flaked corn-based high-grain diets. Fecal samples were collected from each pen floor before initiating dietary treatments and at least once every 2 weeks after final diets began. Overall prevalence of E. coli O157:H7 in fecal samples was 5.1%. There were no significant effects of DDGS, DRC, or sampling time on E. coli O157:H7 prevalence (p > 0.20). Overall prevalence of Salmonella in pen floor fecal samples was 23.7%, and sampling week affected prevalence (p < 0.01), ranging from < 1%(week 1) to 77.5%(week 17). Salmonella prevalence was not affected by cattle diet, and no work had previously reported an association between either DG or DRC and Salmonella prevalence. Lack of an association between E. coli O157:H7 prevalence and feeding DG or DRC is contrary to previous observations. Further research is needed to understand inconsistencies between studies of E. coli O157:H7 prevalence and potential associations with DG and grain-processing methods.

Salmonella enterica in cattle production systems may be associated with important human and animal disease issues. However, tremendous diversity exists among Salmonella recovered, and more information is needed about strains of greatest potential health concern, particularly those that are multidrug resistant (MDR). By characterizing Salmonella isolates from commercial feedlot pens, this study aimed to evaluate the strain diversity and prevalence of MDR Salmonella from different types of composite pen samples. Antimicrobial susceptibility profiles, serotype, and presence or absence of the integron-encoded intI1 gene were determined for 530 Salmonella isolates recovered using composite rope (n = 335), feces (n = 59), and water (n = 136) samples from 21 pens in 3 feedlots. The study investigated only pens with available isolates from multiple sample types. Most isolates (83.0%) of the 19 Salmonella serotypes identified were susceptible or intermediately susceptible to all the antimicrobials evaluated. Resistance to sulfisoxazole (14.9%), streptomycin (3.8%), and tetracycline (3.6%) were the most common. None of the isolates tested positive for a class 1 integron, and only 2.5% were resistant to multiple antimicrobials. All the MDR isolates, namely, serotypes Uganda (n = 9), Typhimurium (n = 2), and Give (n = 2), were resistant to at least five antimicrobials. Most MDR isolates (n = 11) were from two pens during 1 week within one feedlot. Overall, many Salmonella isolates collected within a pen were similar in terms of serotype and antimicrobial susceptibility regardless of sample type. However, MDR Salmonella and rare serotypes were not recovered frequently enough to suggest a general strategy for appropriate composite sampling of feedlot cattle populations for Salmonella detection and monitoring.

A spreadsheet model using Monte Carlo simulation was designed to evaluate the introduction of bovine viral diarrhea virus (BVDV) to cow-calf farms and the effect of different testing strategies. Risks were modeled to include imports to the cow-calf herd and stocker calves imported to adjacent pastures. The number of persistently infected (PI) animals imported and the probability of BVDV introduction were monitored for three herd sizes, four import profiles, and six testing strategies. Importing stockers and importing pregnant heifers were the biggest risks for introduction of BVDV. Testing for PI animals in stockers decreased the risk they posed, but testing pregnant heifers was not sufficient to decrease risk unless their calves were also tested. Test sensitivity was more influential than PI prevalence on the likelihood of BVDV introduction, when all imports were tested. This model predicts the risk of BVDV introduction for individual herds based on management decisions, and should prove to be a useful tool to help cow-calf producers in controlling the risk of importing BVDV to a naïve herd.

A prospective cohort study was used to assess whether Salmonella shedding in commercial feedlot cattle treated with antimicrobials for respiratory disease was associated with the incidence of adverse health outcomes. Feces were collected per rectum from cattle that were examined for apparent respiratory disease, had a rectal temperature >40 degrees C, and subsequently received antimicrobial treatment. Salmonella were recovered from 918 (73.7%) of 1,245 fecal samples and weekly prevalence estimates ranged from 49 to 100% over the 3-month study. Genotypic and phenotypic characteristics of Salmonella strains in the population were determined. Serogroup E Salmonella were most common (73.3%), followed by C1 (11.0%), C3 (8.6%), and B (1.1%). Predominant serotypes were Orion (46.5%), Anatum (19.8%), Kentucky (8.7%), Montevideo (7.5%), and Senftenberg (4.9%). All Salmonella had virulence genes invA and pagC, but few (3.9%) were positive for antimicrobial resistance-associated integron gene intI1. Re-treatment and case fatality rates were numerically higher for individuals that were Salmonella-positive versus -negative at initial treatment, but were not statistically different on multivariate analysis. However, the case fatality rate was higher for cattle shedding Group B Salmonella than for cattle shedding other serogroups. Lots (groups) with a higher Salmonella prevalence at first treatment had a higher proportion of mortalities occur in a hospital pen, higher overall re-treatment rates, and were more likely to be sampled later in the study. Results indicate a high prevalence of Salmonella in cattle treated for respiratory disease, but that effects associated with clinical outcomes may depend on the Salmonella strain and lot-level factors.