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Latest Paper:

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Departamento de Biologia Geral, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brasil.
Lactic acid bacteria (LAB) are an attractive and safe alternative for the expression of heterologous proteins, as they are nonpathogenic and endotoxin-free organisms. Lactococcus lactis, the LAB model organism, has been extensively employed in the biotechnology field for large-scale production of heterologous proteins, and its use as a "cell factory" has been widely studied. We have been particularly interested in the use of L. lactis for production of heat shock proteins (HSPs), which reportedly play important roles in the initiation of innate and adaptive immune responses. However, this activity has been questioned, as LPS contamination appears to be responsible for most, if not all, immunostimulatory activity of HSPs. In order to study the effect of pure HSPs on the immune system, we constructed recombinant L. lactis strains able to produce and properly address the Mycobacterium leprae 65-kDa HSP (Hsp65) to the cytoplasm or to the extracellular medium, using a xylose-induced expression system. Approximately 7 mg/L recombinant Hsp65 was secreted. Degradation products related to lactococcal HtrA activity were not observed, and the Limulus amebocyte lysate assay demonstrated that the amount of LPS in the recombinant Hsp65 preparations was 10-100 times lower than the permitted levels established by the U.S. Food and Drug Administration. These new L. lactis strains will allow investigation of the effects of M. leprae Hsp65 without the interference of LPS; consequently, they have potential for a variety of biotechnological, medical and therapeutic applications.
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Departamento de Engenharia de Materiais e Bioprocessos, Faculdade de Engenharia Química, Universidade Estadual de Campinas , UNICAMP, Campinas 13083-970, SP , Brazil.
We developed cationic liposomes containing DNA through a conventional process involving steps of (i) preformation of liposomes,(ii) extrusion,(iii) drying and rehydration and (iv) DNA complexation. Owing to its high prophylactic potentiality against tuberculosis, which had already been demonstrated in preclinical assays, we introduced modifications into the conventional process towards getting a simpler and more economical process for further scale-up. Elimination of the extrusion step, increasing the lipid concentration (from 16 to 64 mM) of the preformed liposomes and using good manufacturing practice bulk lipids (96-98% purity) instead of analytical grade purity lipids (99.9-100%) were the modifications studied. The differences in the physico-chemical properties, such as average diameter, zeta potential, melting point and morphology of the liposomes prepared through the modified process, were not as significant for the biological properties, such as DNA loading on the cationic liposomes, and effective immune response in mice after immunisation as the control liposomes prepared through the conventional process. Beneficially, the modified process increased productivity by 22% and reduced the cost of raw material by 75%.
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Department of Neuroscience, University of São Paulo at Ribeirão Preto School of Medicine, Ribeirão Preto, SP, Brazil; Department of Neuroscience, University of Lethbridge, Canadian Centre for Behavioural Neuroscience, Lethbridge, AB, Canada.
Central nervous system (CNS) tuberculosis (TB) is the most severe form of TB, characterized morphologically by brain granulomas and tuberculous meningitis (TBM). Experimental strategies for the study of the host-pathogen interaction through the analysis of granulomas and its intrinsic molecular mechanisms could provide new insights into the neuropathology of TB. To verify whether cerebellar mycobacterial infection induces the main features of the disease in human CNS and better understand the physiological mechanisms underlying the disease, we injected bacillus Calmette-Guerin (BCG) into the mouse cerebellum. BCG-induced CNS-TB is characterized by the formation of granulomas and TBM, a build up of bacterial loads in these lesions, and microglial recruitment into the lesion sites. In addition, there is an enhanced expression of signaling molecules such as nuclear factor-κB (NF-κB) and there is a presence of inducible nitric oxide synthase (iNOS) in the lesions and surrounding areas. This murine model of cerebellar CNS-TB was characterized by cellular and biochemical immune responses typically found in the human disease. This model could expand our knowledge about granulomas in TB infection of the cerebellum, and help characterize the physiological mechanisms involved with the progression of this serious illness that is responsible for killing millions people every year.
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CQM-UMa, Centro de Química da Madeira, Centro de Ciências Exactas e da Engenharia da Universidade da Madeira, Campus Universitário da Penteada, 9000-390 Funchal, Portugal.
A novel analytical approach, based on a miniaturized extraction technique, the microextraction by packed sorbent (MEPS), followed by ultrahigh pressure liquid chromatography (UHPLC) separation combined with a photodiode array (PDA) detection, has been developed and validated for the quantitative determination of sixteen biologically active phenolic constituents of wine. In addition to performing routine experiments to establish the validity of the assay to internationally accepted criteria (linearity, sensitivity, selectivity, precision, accuracy), experiments are included to assess the effect of the important experimental parameters on the MEPS performance such as the type of sorbent material (C2, C8, C18, SIL, and M1), number of extraction cycles (extract-discard), elution volume, sample volume, and ethanol content, were studied. The optimal conditions of MEPS extraction were obtained using C8 sorbent and small sample volumes (250 μL) in five extraction cycle and in a short time period (about 5 min for the entire sample preparation step). The wine bioactive phenolics were eluted by 250 μL of the mixture containing 95% methanol and 5% water, and the separation was carried out on a HSS T3 analytical column (100 mm × 2.1mm, 1.8 μm particle size) using a binary mobile phase composed of aqueous 0.1% formic acid (eluent A) and methanol (eluent B) in the gradient elution mode (10 min of total analysis). The method gave satisfactory results in terms of linearity with r(2)(-values)>0.9986 within the established concentration range. The LOD varied from 85 ng mL(-1)(ferulic acid) to 0.32 μg mL(-1)((+)-catechin), whereas the LOQ values from 0.028 μg mL(-1)(ferulic acid) to 1.08 μg mL(-1)((+)-catechin). Typical recoveries ranged between 81.1 and 99.6% for red wines and between 77.1 and 99.3% for white wines, with relative standard deviations (RSD) no larger than 10%. The extraction yields of the MEPS(C8)/UHPLC-PDA methodology were found between 78.1 (syringic acid) and 99.6%(o-coumaric acid) for red wines and between 76.2 and 99.1% for white wines. The inter-day precision, expressed as the relative standard deviation (RSD%), varied between 0.2%(p-coumaric and o-coumaric acids) and 7.5%(gentisic acid) while the intra-day precision between 0.2%(o-coumaric and cinnamic acids) and 4.7%(gallic acid and (-)-epicatechin). On the basis of analytical validation, it is shown that the MEPS(C8)/UHPLC-PDA methodology proves to be an improved, reliable, and ultra-fast approach for wine bioactive phenolics analysis, because of its capability for determining simultaneously in a single chromatographic run several bioactive metabolites with high sensitivity, selectivity and resolving power within only 10 min. Preliminary studies have been carried out on 34 real whole wine samples, in order to assess the performance of the described procedure. The new approach offers decreased sample preparation and analysis time, and moreover is cheaper, more environmentally friendly and easier to perform as compared to traditional methodologies.
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CQM/UMa - Centro de Química da Madeira, Centro de Ciências Exactas e da Engenharia, Universidade da Madeira, Campus Universitário da Penteada, 9000-390 Funchal, Portugal.
A sensitive assay to identify volatile organic metabolites (VOMs) as biomarkers that can accurately diagnose the onset of breast cancer using non-invasively collected clinical specimens is ideal for early detection. Therefore the aim of this study was to establish the urinary metabolomic profile of breast cancer patients and healthy individuals (control group) and to explore the VOMs as potential biomarkers in breast cancer diagnosis at early stage. Solid-phase microextraction (SPME) using CAR/PDMS sorbent combined with gas chromatography-mass spectrometry was applied to obtain metabolomic information patterns of 26 breast cancer patients and 21 healthy individuals (controls). A total of seventy-nine VOMs, belonging to distinct chemical classes, were detected and identified in control and breast cancer groups. Ketones and sulfur compounds were the chemical classes with highest contribution for both groups. Results showed that excretion values of 6 VOMs among the total of 79 detected were found to be statistically different (p<0.05). A significant increase in the peak area of (-)-4-carene, 3-heptanone, 1,2,4-trimethylbenzene, 2-methoxythiophene and phenol, in VOMs of cancer patients relatively to controls was observed. Statistically significant lower abundances of dimethyl disulfide were found in cancer patients. Bioanalytical data were submitted to multivariate statistics [principal component analysis (PCA)], in order to visualize clusters of cases and to detect the VOMs that are able to differentiate cancer patients from healthy individuals. Very good discrimination within breast cancer and control groups was achieved. Nevertheless, a deep study using a larger number of patients must be carried out to confirm the results.
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[My paper] A Adare, S Afanasiev, C Aidala, N N Ajitanand, Y Akiba, H Al-Bataineh, J Alexander, K Aoki, Y Aramaki, E T Atomssa, R Averbeck, T C Awes, B Azmoun, V Babintsev, M Bai, G Baksay, L Baksay, K N Barish, B Bassalleck, A T Basye, S Bathe, V Baublis, C Baumann, A Bazilevsky, S Belikov, R Belmont, R Bennett, A Berdnikov, Y Berdnikov, A A Bickley, J S Bok, K Boyle, M L Brooks, H Buesching, V Bumazhnov, G Bunce, S Butsyk, C M Camacho, S Campbell, C-H Chen, C Y Chi, M Chiu, I J Choi, R K Choudhury, P Christiansen, T Chujo, P Chung, O Chvala, V Cianciolo, Z Citron, B A Cole, M Connors, P Constantin, M Csanád, T Csörgő, T Dahms, S Dairaku, I Danchev, K Das, A Datta, G David, A Denisov, A Deshpande, E J Desmond, O Dietzsch, A Dion, M Donadelli, O Drapier, A Drees, K A Drees, J M Durham, A Durum, D Dutta, S Edwards, Y V Efremenko, F Ellinghaus, T Engelmore, A Enokizono, H En'yo, S Esumi, B Fadem, D E Fields, M Finger, M Finger Jr, F Fleuret, S L Fokin, Z Fraenkel, J E Frantz, A Franz, A D Frawley, K Fujiwara, Y Fukao, T Fusayasu, I Garishvili, A Glenn, H Gong, M Gonin, Y Goto, R Granier de Cassagnac, N Grau, S V Greene, M Grosse Perdekamp, T Gunji, H-Å Gustafsson, J S Haggerty, K I Hahn, H Hamagaki, J Hamblen, R Han, J Hanks, E P Hartouni, E Haslum, R Hayano, X He, M Heffner, T K Hemmick, T Hester, J C Hill, M Hohlmann, W Holzmann, K Homma, B Hong, T Horaguchi, D Hornback, S Huang, T Ichihara, R Ichimiya, J Ide, Y Ikeda, K Imai, M Inaba, D Isenhower, M Ishihara, T Isobe, M Issah, A Isupov, D Ivanischev, B V Jacak, J Jia, J Jin, B M Johnson, K S Joo, D Jouan, D S Jumper, F Kajihara, S Kametani, N Kamihara, J Kamin, J H Kang, J Kapustinsky, K Karatsu, D Kawall, M Kawashima, A V Kazantsev, T Kempel, A Khanzadeev, K M Kijima, B I Kim, D H Kim, D J Kim, E Kim, E J Kim, S H Kim, Y J Kim, E Kinney, K Kiriluk, A Kiss, E Kistenev, L Kochenda, B Komkov, M Konno, J Koster, D Kotchetkov, A Kozlov, A Král, A Kravitz, G J Kunde, K Kurita, M Kurosawa, Y Kwon, G S Kyle, R Lacey, Y S Lai, J G Lajoie, A Lebedev, D M Lee, J Lee, K Lee, K B Lee, K S Lee, M J Leitch, M A L Leite, E Leitner, B Lenzi, X Li, P Liebing, L A Linden Levy, T Liška, A Litvinenko, H Liu, M X Liu, B Love, R Luechtenborg, D Lynch, C F Maguire, Y I Makdisi, A Malakhov, M D Malik, V I Manko, E Mannel, Y Mao, H Masui, F Matathias, M McCumber, P L McGaughey, N Means, B Meredith, Y Miake, A C Mignerey, P Mikeš, K Miki, A Milov, M Mishra, J T Mitchell, A K Mohanty, Y Morino, A Morreale, D P Morrison, T V Moukhanova, J Murata, S Nagamiya, J L Nagle, M Naglis, M I Nagy, I Nakagawa, Y Nakamiya, T Nakamura, K Nakano, J Newby, M Nguyen, R Nouicer, A S Nyanin, E O'Brien, S X Oda, C A Ogilvie, M Oka, K Okada, Y Onuki, A Oskarsson, M Ouchida, K Ozawa, R Pak, V Pantuev, V Papavassiliou, I H Park, J Park, S K Park, W J Park, S F Pate, H Pei, J-C Peng, H Pereira, V Peresedov, D Yu Peressounko, C Pinkenburg, R P Pisani, M Proissl, M L Purschke, A K Purwar, H Qu, J Rak, A Rakotozafindrabe, I Ravinovich, K F Read, K Reygers, V Riabov, Y Riabov, E Richardson, D Roach, G Roche, S D Rolnick, M Rosati, C A Rosen, S S E Rosendahl, P Rosnet, P Rukoyatkin, P Ružička, B Sahlmueller, N Saito, T Sakaguchi, K Sakashita, V Samsonov, S Sano, T Sato, S Sawada, K Sedgwick, J Seele, R Seidl, A Yu Semenov, R Seto, D Sharma, I Shein, T-A Shibata, K Shigaki, M Shimomura, K Shoji, P Shukla, A Sickles, C L Silva, D Silvermyr, C Silvestre, K S Sim, B K Singh, C P Singh, V Singh, M Slunečka, R A Soltz, W E Sondheim, S P Sorensen, I V Sourikova, N A Sparks, P W Stankus, E Stenlund, S P Stoll, T Sugitate, A Sukhanov, J Sziklai, E M Takagui, A Taketani, R Tanabe, Y Tanaka, K Tanida, M J Tannenbaum, S Tarafdar, A Taranenko, P Tarján, H Themann, T L Thomas, M Togawa, A Toia, L Tomášek, H Torii, R S Towell, I Tserruya, Y Tsuchimoto, C Vale, H Valle, H W van Hecke, E Vazquez-Zambrano, A Veicht, J Velkovska, R Vértesi, A A Vinogradov, M Virius, V Vrba, E Vznuzdaev, X R Wang, D Watanabe, K Watanabe, Y Watanabe, F Wei, R Wei, J Wessels, S N White, D Winter, J P Wood, C L Woody, R M Wright, M Wysocki, W Xie, Y L Yamaguchi, K Yamaura, R Yang, A Yanovich, J Ying, S Yokkaichi, Z You, G R Young, I Younus, I E Yushmanov, W A Zajc, C Zhang, S Zhou, L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
Flow coefficients v_{n} for n=2, 3, 4, characterizing the anisotropic collective flow in Au+Au collisions at sqrt[s_{NN}]=200  GeV, are measured relative to event planes Ψ_{n}, determined at large rapidity. We report v_{n} as a function of transverse momentum and collision centrality, and study the correlations among the event planes of different order n. The v_{n} are well described by hydrodynamic models which employ a Glauber Monte Carlo initial state geometry with fluctuations, providing additional constraining power on the interplay between initial conditions and the effects of viscosity as the system evolves. This new constraint can serve to improve the precision of the extracted shear viscosity to entropy density ratio η/s.
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[My paper] A Adare, S Afanasiev, C Aidala, N N Ajitanand, Y Akiba, H Al-Bataineh, J Alexander, A Angerami, K Aoki, N Apadula, Y Aramaki, E T Atomssa, R Averbeck, T C Awes, B Azmoun, V Babintsev, M Bai, G Baksay, L Baksay, K N Barish, B Bassalleck, A T Basye, S Bathe, V Baublis, C Baumann, A Bazilevsky, S Belikov, R Belmont, R Bennett, A Berdnikov, Y Berdnikov, J H Bhom, D S Blau, J S Bok, K Boyle, M L Brooks, H Buesching, V Bumazhnov, G Bunce, S Butsyk, S Campbell, A Caringi, C-H Chen, C Y Chi, M Chiu, I J Choi, J B Choi, R K Choudhury, P Christiansen, T Chujo, P Chung, O Chvala, V Cianciolo, Z Citron, B A Cole, Z Conesa del Valle, M Connors, M Csanád, T Csörgo, T Dahms, S Dairaku, I Danchev, K Das, A Datta, G David, M K Dayananda, A Denisov, A Deshpande, E J Desmond, K V Dharmawardane, O Dietzsch, A Dion, M Donadelli, O Drapier, A Drees, K A Drees, J M Durham, A Durum, D Dutta, L D'Orazio, S Edwards, Y V Efremenko, F Ellinghaus, T Engelmore, A Enokizono, H En'yo, S Esumi, B Fadem, D E Fields, M Finger, M Finger Jr, F Fleuret, S L Fokin, Z Fraenkel, J E Frantz, A Franz, A D Frawley, K Fujiwara, Y Fukao, T Fusayasu, I Garishvili, A Glenn, H Gong, M Gonin, Y Goto, R Granier de Cassagnac, N Grau, S V Greene, G Grim, M Grosse Perdekamp, T Gunji, H-Å Gustafsson, J S Haggerty, K I Hahn, H Hamagaki, J Hamblen, R Han, J Hanks, E Haslum, R Hayano, X He, M Heffner, T K Hemmick, T Hester, J C Hill, M Hohlmann, W Holzmann, K Homma, B Hong, T Horaguchi, D Hornback, S Huang, T Ichihara, R Ichimiya, Y Ikeda, K Imai, M Inaba, D Isenhower, M Ishihara, M Issah, A Isupov, D Ivanischev, Y Iwanaga, B V Jacak, J Jia, X Jiang, J Jin, B M Johnson, T Jones, K S Joo, D Jouan, D S Jumper, F Kajihara, J Kamin, J H Kang, J Kapustinsky, K Karatsu, M Kasai, D Kawall, M Kawashima, A V Kazantsev, T Kempel, A Khanzadeev, K M Kijima, J Kikuchi, A Kim, B I Kim, D J Kim, E J Kim, Y-J Kim, E Kinney, Á Kiss, E Kistenev, L Kochenda, B Komkov, M Konno, J Koster, A Král, A Kravitz, G J Kunde, K Kurita, M Kurosawa, Y Kwon, G S Kyle, R Lacey, Y S Lai, J G Lajoie, A Lebedev, D M Lee, J Lee, K B Lee, K S Lee, M J Leitch, M A L Leite, X Li, P Lichtenwalner, P Liebing, L A Linden Levy, T Liška, A Litvinenko, H Liu, M X Liu, B Love, D Lynch, C F Maguire, Y I Makdisi, A Malakhov, M D Malik, V I Manko, E Mannel, Y Mao, H Masui, F Matathias, M McCumber, P L McGaughey, N Means, B Meredith, Y Miake, T Mibe, A C Mignerey, K Miki, A Milov, J T Mitchell, A K Mohanty, H J Moon, Y Morino, A Morreale, D P Morrison, T V Moukhanova, T Murakami, J Murata, S Nagamiya, J L Nagle, M Naglis, M I Nagy, I Nakagawa, Y Nakamiya, K R Nakamura, T Nakamura, K Nakano, S Nam, J Newby, M Nguyen, M Nihashi, R Nouicer, A S Nyanin, C Oakley, E O'Brien, S X Oda, C A Ogilvie, M Oka, K Okada, Y Onuki, A Oskarsson, M Ouchida, K Ozawa, R Pak, V Pantuev, V Papavassiliou, I H Park, S K Park, W J Park, S F Pate, H Pei, J-C Peng, H Pereira, V Peresedov, D Yu Peressounko, R Petti, C Pinkenburg, R P Pisani, M Proissl, M L Purschke, H Qu, J Rak, I Ravinovich, K F Read, K Reygers, V Riabov, Y Riabov, E Richardson, D Roach, G Roche, S D Rolnick, M Rosati, C A Rosen, S S E Rosendahl, P Rukoyatkin, P Ružička, B Sahlmueller, N Saito, T Sakaguchi, K Sakashita, V Samsonov, S Sano, T Sato, S Sawada, K Sedgwick, J Seele, R Seidl, R Seto, D Sharma, I Shein, T-A Shibata, K Shigaki, M Shimomura, K Shoji, P Shukla, A Sickles, C L Silva, D Silvermyr, C Silvestre, K S Sim, B K Singh, C P Singh, V Singh, M Slunečka, R A Soltz, W E Sondheim, S P Sorensen, I V Sourikova, P W Stankus, E Stenlund, S P Stoll, T Sugitate, A Sukhanov, J Sziklai, E M Takagui, A Taketani, R Tanabe, Y Tanaka, S Taneja, K Tanida, M J Tannenbaum, S Tarafdar, A Taranenko, H Themann, D Thomas, T L Thomas, M Togawa, A Toia, L Tomášek, H Torii, R S Towell, I Tserruya, Y Tsuchimoto, C Vale, H Valle, H W van Hecke, E Vazquez-Zambrano, A Veicht, J Velkovska, R Vértesi, M Virius, V Vrba, E Vznuzdaev, X R Wang, D Watanabe, K Watanabe, Y Watanabe, F Wei, R Wei, J Wessels, S N White, D Winter, C L Woody, R M Wright, M Wysocki, Y L Yamaguchi, K Yamaura, R Yang, A Yanovich, J Ying, S Yokkaichi, Z You, G R Young, I Younus, I E Yushmanov, W A Zajc, S Zhou, L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
Back-to-back hadron pair yields in d+Au and p+p collisions at √s(NN)=200 GeV were measured with the PHENIX detector at the Relativistic Heavy Ion Collider. Rapidity separated hadron pairs were detected with the trigger hadron at pseudorapidity |η|<0.35 and the associated hadron at forward rapidity (deuteron direction, 3.0<η<3.8). Pairs were also detected with both hadrons measured at forward rapidity; in this case, the yield of back-to-back hadron pairs in d+Au collisions with small impact parameters is observed to be suppressed by a factor of 10 relative to p+p collisions. The kinematics of these pairs is expected to probe partons in the Au nucleus with a low fraction x of the nucleon momenta, where the gluon densities rise sharply. The observed suppression as a function of nuclear thickness, p(T), and η points to cold nuclear matter effects arising at high parton densities.
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[My paper] A Adare, S Afanasiev, C Aidala, N N Ajitanand, Y Akiba, H Al-Bataineh, J Alexander, A Angerami, K Aoki, N Apadula, L Aphecetche, Y Aramaki, J Asai, E T Atomssa, R Averbeck, T C Awes, B Azmoun, V Babintsev, M Bai, G Baksay, L Baksay, A Baldisseri, K N Barish, P D Barnes, B Bassalleck, A T Basye, S Bathe, S Batsouli, V Baublis, C Baumann, A Bazilevsky, S Belikov, R Belmont, R Bennett, A Berdnikov, Y Berdnikov, J H Bhom, A A Bickley, D S Blau, J G Boissevain, J S Bok, H Borel, K Boyle, M L Brooks, H Buesching, V Bumazhnov, G Bunce, S Butsyk, C M Camacho, S Campbell, A Caringi, B S Chang, W C Chang, J-L Charvet, C-H Chen, S Chernichenko, C Y Chi, M Chiu, I J Choi, J B Choi, R K Choudhury, P Christiansen, T Chujo, P Chung, A Churyn, O Chvala, V Cianciolo, Z Citron, B A Cole, Z Conesa del Valle, M Connors, P Constantin, M Csanád, T Csörgo, T Dahms, S Dairaku, I Danchev, K Das, A Datta, G David, M K Dayananda, A Denisov, D d'Enterria, A Deshpande, E J Desmond, K V Dharmawardane, O Dietzsch, A Dion, M Donadelli, O Drapier, A Drees, K A Drees, A K Dubey, J M Durham, A Durum, D Dutta, V Dzhordzhadze, L D'Orazio, S Edwards, Y V Efremenko, F Ellinghaus, T Engelmore, A Enokizono, H En'yo, S Esumi, K O Eyser, B Fadem, D E Fields, M Finger, M Finger Jr, F Fleuret, S L Fokin, Z Fraenkel, J E Frantz, A Franz, A D Frawley, K Fujiwara, Y Fukao, T Fusayasu, I Garishvili, A Glenn, H Gong, M Gonin, J Gosset, Y Goto, R Granier de Cassagnac, N Grau, S V Greene, G Grim, M Grosse Perdekamp, T Gunji, H-Å Gustafsson, A Hadj Henni, J S Haggerty, K I Hahn, H Hamagaki, J Hamblen, R Han, J Hanks, E P Hartouni, K Haruna, E Haslum, R Hayano, X He, M Heffner, T K Hemmick, T Hester, J C Hill, M Hohlmann, W Holzmann, K Homma, B Hong, T Horaguchi, D Hornback, S Huang, T Ichihara, R Ichimiya, H Iinuma, Y Ikeda, K Imai, J Imrek, M Inaba, D Isenhower, M Ishihara, T Isobe, M Issah, A Isupov, D Ivanischev, Y Iwanaga, B V Jacak, J Jia, X Jiang, J Jin, B M Johnson, T Jones, K S Joo, D Jouan, D S Jumper, F Kajihara, S Kametani, N Kamihara, J Kamin, J H Kang, J Kapustinsky, K Karatsu, M Kasai, D Kawall, M Kawashima, A V Kazantsev, T Kempel, A Khanzadeev, K M Kijima, J Kikuchi, A Kim, B I Kim, D H Kim, D J Kim, E Kim, E J Kim, S H Kim, Y-J Kim, E Kinney, K Kiriluk, Á Kiss, E Kistenev, J Klay, C Klein-Boesing, L Kochenda, B Komkov, M Konno, J Koster, A Kozlov, A Král, A Kravitz, G J Kunde, K Kurita, M Kurosawa, M J Kweon, Y Kwon, G S Kyle, R Lacey, Y S Lai, J G Lajoie, D Layton, A Lebedev, D M Lee, J Lee, K B Lee, K S Lee, T Lee, M J Leitch, M A L Leite, B Lenzi, X Li, P Lichtenwalner, P Liebing, L A Linden Levy, T Liška, A Litvinenko, H Liu, M X Liu, B Love, D Lynch, C F Maguire, Y I Makdisi, A Malakhov, M D Malik, V I Manko, E Mannel, Y Mao, L Mašek, H Masui, F Matathias, M McCumber, P L McGaughey, D McGlinchey, N Means, B Meredith, Y Miake, T Mibe, A C Mignerey, P Mikeš, K Miki, A Milov, M Mishra, J T Mitchell, A K Mohanty, H J Moon, Y Morino, A Morreale, D P Morrison, T V Moukhanova, D Mukhopadhyay, T Murakami, J Murata, S Nagamiya, J L Nagle, M Naglis, M I Nagy, I Nakagawa, Y Nakamiya, K R Nakamura, T Nakamura, K Nakano, S Nam, J Newby, M Nguyen, M Nihashi, T Niita, R Nouicer, A S Nyanin, C Oakley, E O'Brien, S X Oda, C A Ogilvie, M Oka, K Okada, Y Onuki, A Oskarsson, M Ouchida, K Ozawa, R Pak, A P T Palounek, V Pantuev, V Papavassiliou, I H Park, J Park, S K Park, W J Park, S F Pate, H Pei, J-C Peng, H Pereira, V Peresedov, D Yu Peressounko, R Petti, C Pinkenburg, R P Pisani, M Proissl, M L Purschke, A K Purwar, H Qu, J Rak, A Rakotozafindrabe, I Ravinovich, K F Read, S Rembeczki, K Reygers, V Riabov, Y Riabov, E Richardson, D Roach, G Roche, S D Rolnick, M Rosati, C A Rosen, S S E Rosendahl, P Rosnet, P Rukoyatkin, P Ružička, V L Rykov, B Sahlmueller, N Saito, T Sakaguchi, S Sakai, K Sakashita, V Samsonov, S Sano, T Sato, S Sawada, K Sedgwick, J Seele, R Seidl, A Yu Semenov, V Semenov, R Seto, D Sharma, I Shein, T-A Shibata, K Shigaki, M Shimomura, K Shoji, P Shukla, A Sickles, C L Silva, D Silvermyr, C Silvestre, K S Sim, B K Singh, C P Singh, V Singh, M Slunečka, A Soldatov, R A Soltz, W E Sondheim, S P Sorensen, I V Sourikova, F Staley, P W Stankus, E Stenlund, M Stepanov, A Ster, S P Stoll, T Sugitate, C Suire, A Sukhanov, J Sziklai, E M Takagui, A Taketani, R Tanabe, Y Tanaka, S Taneja, K Tanida, M J Tannenbaum, S Tarafdar, A Taranenko, P Tarján, H Themann, D Thomas, T L Thomas, M Togawa, A Toia, L Tomášek, Y Tomita, H Torii, R S Towell, V-N Tram, I Tserruya, Y Tsuchimoto, C Vale, H Valle, H W van Hecke, E Vazquez-Zambrano, A Veicht, J Velkovska, R Vértesi, A A Vinogradov, M Virius, A Vossen, V Vrba, E Vznuzdaev, X R Wang, D Watanabe, K Watanabe, Y Watanabe, F Wei, R Wei, J Wessels, S N White, D Winter, C L Woody, R M Wright, M Wysocki, W Xie, Y L Yamaguchi, K Yamaura, R Yang, A Yanovich, J Ying, S Yokkaichi, Z You, G R Young, I Younus, I E Yushmanov, W A Zajc, O Zaudtke, C Zhang, S Zhou, L Zolin
University of Colorado, Boulder, Colorado 80309, USA.
We present measurements of J/ψ yields in d+Au collisions at sqrt[s(NN)]=200  GeV recorded by the PHENIX experiment and compare them with yields in p+p collisions at the same energy per nucleon-nucleon collision. The measurements cover a large kinematic range in J/ψ rapidity (-2.2<y<2.4) with high statistical precision and are compared with two theoretical models: one with nuclear shadowing combined with final state breakup and one with coherent gluon saturation effects. In order to remove model dependent systematic uncertainties we also compare the data to a simple geometric model. The forward rapidity data are inconsistent with nuclear modifications that are linear or exponential in the density weighted longitudinal thickness, such as those from the final state breakup of the bound state.
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Department of Biochemistry and Immunology, School of Medicine of Ribeirão Preto, University of São Paulo, Riberão Preto, Brazil.
BACKGROUND Previous studies have established that mycobacterial infections ameliorate allergic inflammation. However, a non-infectious approach that controls allergic responses might represent a safer and more promising strategy. The 60-65 kDa heat shock protein (Hsp) family is endowed with anti-inflammatory properties, but it is still unclear whether and how single mycobacterial Hsp control allergic disorders. OBJECTIVE Therefore, in this study we determined whether the administration of Mycobacterial leprae Hsp65 expressed by recombinant a DNA plasmid could attenuate a previously established allergic response. METHODS We used an experimental model of airway allergic inflammation to test the effects of immunotherapy with DNA encoding Hsp65. Allergic mice, previously sensitized and challenged with ovalbumin, were treated with tree intramuscular doses of recombinant DNA encoding Hsp65. After treatment, mice received a second allergen challenge and the allergic response was measured. RESULTS We found that immunotherapy attenuated eosinophilia, pulmonary inflammation, Th2 cytokine and mucus production. Moreover, we showed that the inhibition of allergic response is dependent on IL-10 production. Both Hsp65 and allergen-specific IL-10-producing cells contributed to this effect. Cells transferred from DNA-immunized mice to allergic mice migrated to allergic sites and down-modulated the Th2 response. CONCLUSIONS AND CLINICAL RELEVANCE Our findings clearly show that immunotherapy with DNA encoding Hsp65 can attenuate an established Th2 allergic inflammation through an IL-10-dependent mechanism; moreover, the migration of allergen- and Hsp65-specific cells to the allergic sites exerts a fundamental role. This work represents a novel contribution to the understanding of immune regulation by Hsp65 in allergic diseases.
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Centro de Química da Madeira, Centro de Ciências Exactas e da Engenharia, Universidade da Madeira, Campus Universitário da Penteada, Funchal, Portugal.
BACKGROUND Non-invasive diagnostic strategies aimed at identifying biomarkers of cancer are of great interest for early cancer detection. Urine is potentially a rich source of volatile organic metabolites (VOMs) that can be used as potential cancer biomarkers. Our aim was to develop a generally reliable, rapid, sensitive, and robust analytical method for screening large numbers of urine samples, resulting in a broad spectrum of native VOMs, as a tool to evaluate the potential of these metabolites in the early diagnosis of cancer. METHODS To investigate urinary volatile metabolites as potential cancer biomarkers, urine samples from 33 cancer patients (oncological group: 14 leukaemia, 12 colorectal and 7 lymphoma) and 21 healthy (control group, cancer-free) individuals were qualitatively and quantitatively analysed. Dynamic solid-phase microextraction in headspace mode (dHS-SPME) using a carboxen-polydimethylsiloxane (CAR/PDMS) sorbent in combination with GC-qMS-based metabolomics was applied to isolate and identify the volatile metabolites. This method provides a potential non-invasive method for early cancer diagnosis as a first approach. To fulfil this objective, three important dHS-SPME experimental parameters that influence extraction efficiency (fibre coating, extraction time and temperature of sampling) were optimised using a univariate optimisation design. The highest extraction efficiency was obtained when sampling was performed at 50°C for 60 min using samples with high ionic strengths (17% sodium chloride, w v(-1)) and under agitation. RESULTS A total of 82 volatile metabolites belonging to distinct chemical classes were identified in the control and oncological groups. Benzene derivatives, terpenoids and phenols were the most common classes for the oncological group, whereas ketones and sulphur compounds were the main classes that were isolated from the urine headspace of healthy subjects. The results demonstrate that compound concentrations were dramatically different between cancer patients and healthy volunteers. The positive rates of 16 patients among the 82 identified were found to be statistically different (P<0.05). A significant increase in the peak area of 2-methyl-3-phenyl-2-propenal, p-cymene, anisole, 4-methyl-phenol and 1,2-dihydro-1,1,6-trimethyl-naphthalene in cancer patients was observed. On average, statistically significant lower abundances of dimethyl disulphide were found in cancer patients. CONCLUSIONS Gas chromatographic peak areas were submitted to multivariate analysis (principal component analysis and supervised linear discriminant analysis) to visualise clusters within cases and to detect the volatile metabolites that are able to differentiate cancer patients from healthy individuals. Very good discrimination within cancer groups and between cancer and control groups was achieved.
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2012-05-23 09:50:52 © BioInfoBank Institute