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BioInfoBank Library
This site is aimed at supporting and promoting the scientific activity of students and scientists.
The site facilitates fast publication of research results through short and concise reports, exchange of ideas and comments through dedicated forums and blogs and provides space to place structured resumes.
The site also offers useful search capabilities such as the selection of similar papers to a group of papers.
In an effort to promote the utilities of this service we have launched two competitions, the best report competition and the best thesis competition.
Both offer a chance to win small prizes and put Your work on our hall of fame.
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NYT - 13 days ago |
152 |
Five news stories of other non-Apple tablet news including Twitter features, online privacy and an in-depth look at Microsoft's Windows 7 XP Mode. |
[apple, profile, twitter, google, francisco, blog, start-ups, san, microsoft, privacy, enterprise, reporter, bit, bowl, driver] |
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Reuters - 13 days ago |
84 |
OSLO (Reuters) - Climate change caused by mankind will release extra heat-trapping gases stored in nature into the atmosphere in a small spur to global warming, a study showed. |
[feedback, temperature, dioxide, frank, atmosphere, u.n, warm, celsiu, air, warmer, ocean, all, soil, cycle, surprise] |
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Yahoo - 13 days ago |
119 |
HealthDay - (HealthDay News) -- Ear infections are common in children, and may be chronic. |
[tip, teacher, fox, degree, shoulder, plot, trauma, accus, conservative, lesson, ear, teach, breakthrough, pain, don] |
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Reuters - 13 days ago |
210 |
WASHINGTON (Reuters) - Researchers have transformed ordinary mouse skin cells directly into neurons, bypassing the need for stem cells or even stemlike cells and greatly speeding up the field of regenerative medicine. |
[stem, skin, transform, neuron, embryo, all, fee, clinical, nerve, abusive, directly, ordinary, leap, patent, heal] |
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NYT - 13 days ago |
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Fossilized structures of what appear to be feathers match the feathers of living birds down to the microscopic level, and from them scientists have determined what color the ancient feathers were. |
[dinosaur, fossil, bird, color, paleontologist, structure, argu, tail, microscopic, skin, radiation, skeptic, bone, complete, wine] |
In recent years, our society has been dealing with one of the most formidable challenges in maintaining a good quality of water supply due to the potential seepage of landfill leachate (Figure 1). As a result, the groundwater in several sites that are close to open dumps might have been contaminated. Consequently, the presence of emerging contaminants such as endocrine-disrupting compounds (EDC) in such highly contaminated wastewater has emerged as one of the most serious environmental concerns worldwide. Various environmental technologies have been employed to remove refractory compounds from landfill leachate. However, to date neither type of existing conventional treatment is universally applicable and/or highly effective. This suggests the need for technological advancements in water treatment to benefit people in many parts of the world. The diverse applications of nanotechnology across a number of disciplines in recent years have inspired environmental researchers to address the need for an efficient and effective leachate treatment. In spite of its unproven track record in environmental applications in the past five years, researchers found that nanomaterials could play a key role in pollution control strategies. Nanomaterials are a fascinating form of substances with behavior lying between that of individual atoms and molecules and the bulky state. Due to their large surface area and high reactivity, nanoparticles with sizes ranging from 1 to 100 nm have the potential to be applied in wastewater treatment to remove refractory compounds from landfill leachate (Figure 2). For this reason, integrating nanosized materials with different functionalities into a composite material is of great interest to environmental researchers worldwide. This material is able to integrate one or more individual components to exhibit the best properties of each component. The manipulation process of their physico-chemical conditions during synthesis may enable the nanomaterials to be highly reactive during treatment when they are deployed in ex-situ slurry reactors. Such nanostructured materials are low-cost, mobile, portable and efficient systems that can effectively sequester target pollutants from a remote environment that is difficult to access (Figure 3). Several nanomaterials include magnetic nanoparticles, heterogeneous nanophotocatalysts, and polymeric nanoparticles. Due to their strong magnetic properties, magnetic nanomaterials act not only as an adsorbent to remove target compounds from contaminated water, but also as a magnetic element to attract and retain the nanoparticles, which can be removed from solutions. This magnetic separation, which may replace centrifuge separation technologies, has less complicated technical requirements and low regeneration cost, thus making adsorption treatment economically attractive for industrial users. Cradle-to-cradle processes in nanotechnology have also led researchers to develop a variety of photocatalytic derivatives that have nanosize such as TiO2. Due to its superb light absorbing capabilities, low cost, and non-toxicity, TiO2 has emerged as one of the most attractive nanophotocatalysts for treatment of contaminated water. In its combined application with advanced oxidation process, TiO2 in the presence of UV is capable of breaking down various refractory pollutants in leachate into relatively harmless compounds. The applications of UV to activate the TiO2 nanoparticles may facilitate green technology for environmental remediation in an aquatic environment. In addition, polymeric nanoparticles are developed as potential adsorbents for water treatment. Like surfactant micelles, they have amphiphilic characters. Their unique properties are attributed to individual polymers that compose the particles through graft copolymerization. When being integrated with photocatalytic degradation using TiO2 nanophotocatalyst, the applications of polymeric nanoparticles for water treatment may provide a sustainable treatment approach with potentially low energy consumption and CO2 emission, thus contributing to a green environment. Although extensive research involving various nanomaterials has already been carried out across disciplines, there is still much research work that needs to be conducted to attain a major technological breakthrough for water treatment. As reflected in Figure 4, there is a long way to go before the technique production of nanomaterials can sustain a supply of high quality products at an affordable price in the market. It is anticipated that in the next few years, various nanoproducts such as sorbents, sensors and reactants will not only play leading roles in the new generation of environmental technology, but also revolutionize the world in which we live. It is expected that low cost and environmentally friendly nanomaterials capable of detecting contaminants at the molecular or atomic level may substantially help us protect the environment (Figure 5). While it is still on the scale of laboratory/pilot research today, the progress made so far has indicated a promising business value that nanomaterials may bring to environmental industries (Figure 6). Their applications in water treatment have helped industrial users shift their old paradigm in treating wastewater laden with particular pollutants. Nanotechnologies have opened the way for users to effectively remove target pollutants from contaminated water using less costly, renewable and environmentally benign manufactured products. With nanomaterials, a relatively better future is coming sooner than we anticipate.
The ability to control a prosthetic device directly from the neocortex has been demonstrated in rats, monkeys and humans. Here we investigate whether neural control can be accomplished in situations where (1) subjects have not received prior motor training to control the device (naive user) and (2) the neural encoding of movement parameters in the cortex is unknown to the prosthetic device (naive controller). By adopting a decoding strategy that identifies and focuses on units whose firing rate properties are best suited for control, we show that naive subjects mutually adapt to learn control of a neural prosthetic system. Six untrained Long-Evans rats, implanted with silicon micro-electrodes in the motor cortex, learned cortical control of an auditory device without prior motor characterization of the recorded neural ensemble. Single- and multi-unit activities were decoded using a Kalman filter to represent an audio "cursor"(90 ms tone pips ranging from 250 Hz to 16 kHz) which subjects controlled to match a given target frequency. After each trial, a novel adaptive algorithm trained the decoding filter based on correlations of the firing patterns with expected cursor movement. Each behavioral session consisted of 100 trials and began with randomized decoding weights. Within 7 +/- 1.4 (mean +/- SD) sessions, all subjects were able to significantly score above chance (P < 0.05, randomization method) in a fixed target paradigm. Training lasted 24 sessions in which both the behavioral performance and signal to noise ratio of the peri-event histograms increased significantly (P < 0.01, ANOVA). Two rats continued training on a more complex task using a bilateral, two-target control paradigm. Both subjects were able to significantly discriminate the target tones (P < 0.05, Z-test), while one subject demonstrated control above chance (P < 0.05, Z-test) after 12 sessions and continued improvement with many sessions achieving over 90% correct targets. Dynamic analysis of binary trial responses indicated that early learning for this subject occurred during session 6. This study demonstrates that subjects can learn to generate neural control signals that are well suited for use with external devices without prior experience or training.
Sher Institute for Reproductive Medicine, Las Vegas, Nevada; Department of Obstetrics and Gynecology, School of Medicine, University of Nevada, Reno, Nevada.
OBJECTIVE: To use metaphase II (MII) bovine oocytes as a model for MII human oocyte cryopreservation and to determine the effect of different previtrification equilibration temperatures, vitrification solutions, zona slitting, and first polar body biopsy on in vitro and in vivo developmental competence of MII human oocytes after the CryoLoop vitrification method. DESIGN: In vitro and in vivo studies. SETTING: A private infertility clinic. PATIENT(S): Women undergoing infertility treatment. INTERVENTION(S): Metaphase II stage bovine and MII human oocytes underwent first polar body biopsy before cryopreservation in different vitrification conditions, and human oocytes were fertilized by intracytoplasmic sperm injection after warming. The resulting embryos were transferred into women undergoing infertility treatment. MAIN OUTCOME MEASURE(S): Postvitrification morphologic survival, in vitro blastocyst development, and clinical outcome after ET. RESULT(S): The equilibration temperature had a significant effect on cryosurvival of both bovine and human oocytes. High (97%-99%) postvitrification survival was achieved for both MII bovine and human oocytes, and high fertilization (90%-97%) at 35 degrees C to 37 degrees C, blastocyst development (18%-45%), and pregnancy (50%) rates were achieved at 35 degrees C with 5.0 mol/L ethylene glycol + 1.3 mol/L dimethyl sulfoxide for MII human oocytes that underwent first polar body biopsy. CONCLUSION(S): Previtrification equilibration temperature had a profound effect on the postthaw developmental competence of MII human oocytes in vitro and in vivo. The CryoLoop vitrification of first polar body-biopsied MII human oocytes in the presence of 5 mol/L ethylene glycol plus 1.3 mol/L dimethyl sulfoxide gave the best results in terms of fertilization, embryo development, and implantation rates.
Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI.
We hypothesized that re-entry into the cell cycle may be associated with reactive gliosis surrounding neural prostheses, and that administration of a cell cycle inhibitor (flavopiridol) at the time of surgery would reduce this effect. We investigated the effects of flavopiridol on recording quality and impedance over a 28 day time period and conducted histology at 3 and 28 days post-implantation. Flavopiridol reduced the expression of a cell cycle protein (cyclin D1) in microglia surrounding probes at the 3 day time point. Impedance at 1kHz was decreased by drug administration across the study period compared to vehicle controls. Correlations between recording (SNR, units) and impedance metrics revealed a small, but statistically significant, inverse relationship between these variables. However, the relationship between impedance and recording quality was not sufficiently strong for flavopiridol to result in an improvement in SNR or the number of units detected. Our data indicate that flavopiridol is an effective, easily administered treatment for reducing impedance in vivo, potentially through inhibiting microglial encapsulation of implanted devices. This strategy may be useful in stimulation applications, where reduced impedance is desirable for achieving activation thresholds and prolonging the lifetime of the implanted power supply. While improvements in recording quality were not observed, combination of flavopiridol with a second strategy which enhances neuronal signal detection may enhance these results in future studies.
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